Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809604.1_cds_XP_016495849.1_10128
CDS Infomation

[gene=LOC107814867] [db_xref=GeneID:107814867] [protein=KH domain-containing protein At4g18375-like] [protein_id=XP_016495849.1] [location=complement(join(20299..20430,20866..20962,21054..21109,22266..22532,22628..22867,23384..23881,24048..24623))] [gbkey=CDS]
Sequence

ATGGGCGAGACTGGAAAACGATCGCGTAGGGATGACGGGGATAGCAAGAACCAGAAGAGG
AGGACAGAGAGAGATGAGAAAGGCGATGATGAACTAGTGGTGTACAGAATTCTATGCCCA
GATAATGTGATTGGTAGTGTTATTGGAAAGAGTGGGAAAGTCATAAATTCGATTAGAGCC
GAGACCAAGGCGAAGGTCAAGGTGGTGGACCCATTTCCAGGTGCTAAGGATAGAGTTATA
ACCATTTATTGCTATGTAAAAGAAAAGGAAGATGTTGAGGTTGACGAGGAGTTCAATGAG
AAAAAACCTCTTTGCTCTGCTCAGGATGCTCTTCTAAGGGTTTATACGGCAATTGCAAAT
GCCTTGGCAGCTGTTGGAGATTCTGATAAGAAGCGCAAGGAAAAAGAGGAGTGTCAGCTT
CTTGTTCCATCGAGCCAGTCTGCAAATATCATTGGTAAATCTGGTACCACCATAAAGAAG
TTGAGAAGCAAGATGAGGGCTAATATTAAAGTTATTGCTAAAGATGCTAGCGATCCAACA
CATTCCTGTGCTCTCGAGTTTGATAACTTTGTTCTGATAACTGGTGACTCAGAATCAGTA
AAGAGATCGCTCTTTGCTGTTTCTGCAATCATGTACAAGTTCACACCTAAGGAAGATATT
CCTCTTAATACTAATGTTCCTGAAGTTCGTCCAAGCATTATTATTCCTTCAGATGTTCCC
ATATATCCAGCAGCTGGGATTTATCAAAATGTGGATCCTATTATCCCATCTAGATCTGTT
CCATCTGTTTTAGGCACCACACACATACCAGAGCTTCCAGGTTATGTAGATGCAGGAAGC
ACATGGCCGGTTTATTCTTCTGCTCTTCCCATGGTTTCTGGTTACGGTGGTGGTGCCTCT
CAAACTGAGGAATTGACTATTAGAGTGTTGTGTCCAACTAACAATATTGGGCGTGTTATT
GGAAAAGGAGGAGCTTCTATTAAAAGTGTACGGCAAGCAAGTGGTGCTCGTATTGAGGTT
GGTGATGCCAAAGCCGATCGTGATCAGTGCATCATCACAGTCATTTCCACTGAGTCAGTG
GATGATCTTAAATCCATGGCAGTTGAGGCTGTCTTGCTGCTGCAAGGGAAAATAAATGAT
GAAGATGAGGATAGTGTAACTTTTCGTCTACTTGTTCCATCAAAGATCATTGGATGTATC
ATTGGGAAAGGTGGTTCAATCGTTAATGAAATCCGGAAGAGAACTAGAGCTGATGTACGT
ATCTCGAAAGGCCAGAAGCCCAAATGTGCAGATTCAAATGATGAACTTGTTGAGGTGGCT
GGGGAAATTAGTAGTGTGAGGGATGCCCTTATCCAGATTGTACTGAGGCTCAGAGATGAT
GTTCTGAAAGGCCGAGAAGGTAATTTTAATCCATCTGCCGGTGTTGATTCTTTACGCACT
GGTGGTACTGGTCATTCACTGGCTTCAGTTTTGCCCAATGTTCCTCCAACTGCCTCTTTG
AGCTATGAACAGAGGGTTGAGTCTGGGAATGGCATTGGAATGCGTTCTTCGGGAAGCCTC
TATGGTCATGAGTCATTCTCGAGGGGGGATGATGGCTATGGAGCGTACTCTTCATATTCC
TCAAAGATATATGGCGGACCGCCTCCGCCCACAGCTCTAGAGATGGTTATCCCTGGACAT
GCAGTTGGTAAAGTTATTGGTAAAGGTGGCTCAAACATAGATAATATTCGCAAGATATCC
GGAGCAGCTGTGGACATAATTGATTCCAAATCCTCTCGAGGTGATCAAATTGCTATAATA
TCTGGTACACAGGAACAGAAGCGTGCTGCAGAAAACTTGATTCAGGCATTCATAATGGCC
ACTTGA

Peptide Sequence

PEP ID

XP_016495849.1
PEP Infomation

PREDICTED: KH domain-containing protein At4g18375-like [Nicotiana tabacum]
Sequence

MGETGKRSRRDDGDSKNQKRRTERDEKGDDELVVYRILCPDNVIGSVIGKSGKVINSIRA
ETKAKVKVVDPFPGAKDRVITIYCYVKEKEDVEVDEEFNEKKPLCSAQDALLRVYTAIAN
ALAAVGDSDKKRKEKEECQLLVPSSQSANIIGKSGTTIKKLRSKMRANIKVIAKDASDPT
HSCALEFDNFVLITGDSESVKRSLFAVSAIMYKFTPKEDIPLNTNVPEVRPSIIIPSDVP
IYPAAGIYQNVDPIIPSRSVPSVLGTTHIPELPGYVDAGSTWPVYSSALPMVSGYGGGAS
QTEELTIRVLCPTNNIGRVIGKGGASIKSVRQASGARIEVGDAKADRDQCIITVISTESV
DDLKSMAVEAVLLLQGKINDEDEDSVTFRLLVPSKIIGCIIGKGGSIVNEIRKRTRADVR
ISKGQKPKCADSNDELVEVAGEISSVRDALIQIVLRLRDDVLKGREGNFNPSAGVDSLRT
GGTGHSLASVLPNVPPTASLSYEQRVESGNGIGMRSSGSLYGHESFSRGDDGYGAYSSYS
SKIYGGPPPPTALEMVIPGHAVGKVIGKGGSNIDNIRKISGAAVDIIDSKSSRGDQIAII
SGTQEQKRAAENLIQAFIMAT

Transcript Sequence

Gene sequence data has not been registered.